Package index
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abm3pc_sys() - Adams-Bashford-Moulton for system of equations
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add_equilibrium() - Compute equilibrium values
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compute_nll() - Compute negative log-likelihood for EcoState model
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compute_tracer() - Calculate tracers, e.g., trophic level
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dBdt() - Dynamics from EcoSim
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ddirmult() - Dirichlet-multinomial
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eastern_bering_sea - eastern Bering Sea ecosystem data
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ecostate() - fit EcoState model
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ecostate_control() - Detailed control for ecostate structure
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ginv() - Penrose-Moore pseudoinverse
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logLik(<ecostate>) - Marginal log-likelihood
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ode23() - Non-stiff (and stiff) ODE solvers
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plot_foodweb() - Plot foodweb
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print(<ecostate>) - Print fitted ecostate object
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print_ecopars() - Print EcoSim parameters
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rk4sys() - Classical Runge-Kutta for system of equations
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stanza_settings() - Detailed control for stanza structure
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whitehouse_2021 - Full rpath inputs for eastern Bering Sea