Function reference • FishLife

All functions

Calculate_ratio(): Calculate ratio of two modeled traits

Find_ancestors(): Find ancestors

FishBase: Database of size, growth, maturity, and mortality parameters

FishBase_and_Morphometrics: Database of FishBase (population-dynamics, size, growth, maturity, mortality parameters), habitat, trophic, reproductive, and morphometric traits

FishBase_and_RAM: Database of stock-recruit, population-dynamics, size, growth, maturity, and mortality parameters

FishLife: Fisheries life-history database

Fit_model(): Fit and predict fish traits

Match_species(): Match species

Plot_ellipse(): Plot an ellipse

Plot_taxa(): Plots trait predictions for taxa

Plot_trait(): Plots trait predictions

Resize_estimates(): Resize parameter list

Search_species(): Search species

coef(<FishLife>): Extract path coefficients

fit_tmb(): Optimize a TMB model

list_parameters(): List fixed and random effects

print(<FishLife>): Print parameter estimates

setAs as as-method as,sem,sem-method: Convert FishLife to other package formats