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Output from `Fit_model` applied to database scraped from www.FishBase.org using `rfishbase` as well as many other variables

Usage

FishBase_and_Morphometrics

Format

A tagged list containing data and predictions

text

text file specifying the SEM structure

N_obsfactors

Number of factors used for measurent-error in life-history model

beta_gv

Predictive mean (in transformed space) among traits for every taxon in tree

Cov_gvv

Covariance among traits for every taxon in tree

Use_REML

Boolean, whether REML was used for model

ParentChild_gz

Record of taxonomic tree

ParHat

Parameter estimates and predictions

g_i

Associates every observation with a level of the taxonomic tree

Y_ij

Life-history parameters from FishBase

Z_ik

Taxonomy for each datum

SR_obs

Stock-recruit records from RAM Legacy stock-recruit database

StockData

Auxiliary information for every stock with stock-recruit information

RAM

Matrix specifying SEM parameters

SEM_model

Description of SEM path diagram

tree

Evolutionary tree in phylo format, for use in plotting, with order matching ParentChild_gz

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