Changelog
Source:NEWS.md
phylosem 1.1.4
CRAN release: 2024-04-02
- removing
checkDepPackageVersion(dep_pkg="Matrix", this_pkg="TMB")
from.onLoad()
as requested by K. Kristensen
phylosem 1.1.3
CRAN release: 2024-02-01
- Removing fit_tmb to simplify code and remove unnecessary warnings
- Adding codecov and extra tests
- Fixing R-CMD-check to force build Matrix/TMB from source
phylosem 1.1.2
CRAN release: 2023-12-20
- Adding new functions to provide warning if Matrix version doesn’t match what’s expected by TMB
phylosem 1.1.1
CRAN release: 2023-11-26
- Re-adding
phylosignal
as SUGGESTS - Re-adding
phylosignal
to Fisheries vignette - adding arguemnt
what
toas_phylo4d
to allow easy extraction of standard errors
phylosem 1.1.0
CRAN release: 2023-10-06
- Adding new S3 generic functions: logLik and vcov
- Adding vignette “fisheries” associated with paper “Trees for fishes: The neglected role for phylogenetic comparative methods in fisheries science” accepted at Fish and Fisheries
phylosem 1.0.2
CRAN release: 2023-09-22
- Fixed bug arising when data are missing for observations in the earliest tips and for the first inputted variable
- Updating vignette to show confidence intervals on alpha/kappa/lambda as well as lnalppha/lnkappa/logitlambda